Week 1 — Unix and the Command Line

Week beginning October 14th, 2024


Tutors:

Note that these sessions are part of your mandatory training.
Please email the organizers well in advance if you will be late or unable to attend due to illness.
Please bring your MacBooks and ensure that you can log on to Eduroam.


Monday, October 14th

Venue: Quadram Institute, Room UG55C from 9:00 am to 5:00 pm

  • Morning: Introduction to the course, Unix and the Command Line
    • Mark leads, with help from Sam and Wing
  • Afternoon: More Unix
    • Mark leads, with help from Sam and Wing

Tuesday, October 15th

Venue: Quadram Institute, Room UG55C from 9:00 am to 5:00 pm

  • Morning: Jupyter Notebooks
    • Leo leads with help from Sam ± Mark and Wing
  • Afternoon: Installing software and Conda environments
    • Leo leads with help from Sam ± Mark and Wing

Thursday, October 17th

Venue: Quadram Institute, Board Room from 9:00 am to 5:00 pm

  • Morning: Sequence Quality Control
    • Sam leads, with help from Mark
  • Afternoon: Trimming Sequence Files
    • Sam leads, with help from Leo

Friday, October 18th

Venue: Quadram Institute, UG55C from 9:00 am to 1:00 pm

  • Morning: Finding Sequence Variants
    • Leo leads with help from Sam

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